Bioschemas training profiles: A set of specifications for standardizing training information to facilitate the discovery of training programs and resources.

Patricia M. Palagi Patricia Palagi https://orcid.org/0000-0001-9062-6303 https://www.wikidata.org/entity/Q41046938

Leyla Jael Castro Patricia M. Palagi Niall Beard Teresa K. Attwood Michelle D. Brazas Bioschemas training profiles: A set of specifications for standardizing training information to facilitate the discovery of training programs and resources. 2023 19 PLoS Comput. Biol. 6 https://doi.org/10.1371/journal.pcbi.1011120 https://www.wikidata.org/entity/Q126510561 db/journals/ploscb/ploscb19.html#CastroPBAB23

Patricia M. Palagi Russell Schwartz Scott Markel B. F. Francis Ouellette Ten simple rules for writing a PLOS Computational Biology quick tips article. 2023 December 19 PLoS Comput. Biol. 12 https://doi.org/10.1371/journal.pcbi.1011689 https://www.wikidata.org/entity/Q136291422 db/journals/ploscb/ploscb19.html#PalagiSMO23

Celia W. G. van Gelder Alexia Cardona Brane Leskosek Patricia Palagi Building Research Data Management (RDM) Expertise and Training Resources in ELIXIR Nodes. 2023 CoRDI https://doi.org/10.52825/cordi.v1i.382 conf/cordi/2023 db/conf/cordi/cordi2023.html#GelderCLP23

Simon Schwab Perrine Janiaud Michael Dayan Valentin Amrhein Radoslaw Panczak Patricia M. Palagi Lars G. Hemkens Meike Ramon Nicolas Rothen Stephen Senn Eva Furrer Leonhard Held Ten simple rules for good research practice. 2022 18 PLoS Comput. Biol. 6 https://doi.org/10.1371/journal.pcbi.1010139 https://www.wikidata.org/entity/Q113308532 db/journals/ploscb/ploscb18.html#SchwabJDAPPHRRS22

Leyla J. García Bérénice Batut Melissa L. Burke Mateusz Kuzak Fotis E. Psomopoulos Ricardo Arcila Teresa K. Attwood Niall Beard Denise Carvalho-Silva Alexandros C. Dimopoulos Victoria Dominguez Del Angel Michel Dumontier Kim T. Gurwitz Roland Krause Peter McQuilton Loredana Le Pera Sarah L. Morgan Päivi Rauste Allegra Via Pascal Kahlem Gabriella Rustici Celia W. G. van Gelder Patricia M. Palagi Ten simple rules for making training materials FAIR. 2020 16 PLoS Comput. Biol. 5 https://doi.org/10.1371/journal.pcbi.1007854 https://www.wikidata.org/entity/Q100158863 db/journals/ploscb/ploscb16.html#GarciaBBKPAABCD20

Kim T. Gurwitz Prakash Singh Gaur Louisa J. Bellis Lee D. Larcombe Eva Alloza Balint Laszlo Balint Alexander Botzki Jure Dimec Victoria Dominguez Del Angel Pedro L. Fernandes Eija Korpelainen Roland Krause Mateusz Kuzak Loredana Le Pera Brane Leskosek Jessica M. Lindvall Diana Marek Paula Andrea Martínez Tuur Muyldermans Ståle Nygård Patricia M. Palagi Hedi Peterson Fotis E. Psomopoulos Vojtech Spiwok Celia W. G. van Gelder Allegra Via Marko Vidak Daniel Wibberg Sarah L. Morgan Gabriella Rustici A framework to assess the quality and impact of bioinformatics training across ELIXIR. 2020 16 PLoS Comput. Biol. 7 https://doi.org/10.1371/journal.pcbi.1007976 https://www.wikidata.org/entity/Q97677986 db/journals/ploscb/ploscb16.html#GurwitzGBLABBDA20

Vivienne Baillie Gerritsen Patricia M. Palagi Christine Durinx Bioinformatics on a national scale: an example from Switzerland. 361-369 2019 20 Briefings Bioinform. 2 https://doi.org/10.1093/bib/bbx073 https://www.wikidata.org/entity/Q47225783 db/journals/bib/bib20.html#GerritsenPD19

Allegra Via Teresa K. Attwood Pedro L. Fernandes Sarah L. Morgan Maria Victoria Schneider Patricia M. Palagi Gabriella Rustici Rochelle E. Tractenberg A new pan-European Train-the-Trainer programme for bioinformatics: pilot results on feasibility, utility and sustainability of learning. 405-415 2019 20 Briefings Bioinform. 2 https://doi.org/10.1093/bib/bbx112 https://www.wikidata.org/entity/Q47898963 db/journals/bib/bib20.html#ViaAFMSPRT19

Carlos Horro Martin Cook Teresa K. Attwood Michelle D. Brazas John M. Hancock Patricia M. Palagi Manuel Corpas Rafael C. Jiménez BioCIDER: a Contextualisation InDEx for biological Resources discovery. 2607-2608 2017 33 Bioinform. 16 https://doi.org/10.1093/bioinformatics/btx213 https://www.wikidata.org/entity/Q38730789 db/journals/bioinformatics/bioinformatics33.html#HorroCABHPCJ17

Aleksandra Pawlik Celia W. G. van Gelder Aleksandra Nenadic Patricia M. Palagi Eija Korpelainen Philip Lijnzaad Diana Marek Susanna-Assunta Sansone John M. Hancock Carole A. Goble Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. 1040- 2017 6 F1000Research https://doi.org/10.12688/f1000research.11718.1 https://www.wikidata.org/entity/Q38369152 db/journals/f1000research/f1000research6.html#PawlikGNPKLMSHG17

Manuel Corpas Rafael C. Jiménez Erik Bongcam-Rudloff Aidan Budd Michelle D. Brazas Pedro L. Fernandes Bruno A. Gaëta Celia W. G. van Gelder Eija Korpelainen Fran Lewitter Annette McGrath Daniel MacLean Patricia M. Palagi Kristian Rother Jan Taylor Allegra Via Mick Watson Maria Victoria Schneider Teresa K. Attwood The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers. 140-142 2015 31 Bioinform. 1 https://doi.org/10.1093/bioinformatics/btu601 https://www.wikidata.org/entity/Q34737277 db/journals/bioinformatics/bioinformatics31.html#CorpasJBBBFGGKLMMPRTVWSA15

Teresa K. Attwood Erik Bongcam-Rudloff Michelle D. Brazas Manuel Corpas Pascale Gaudet Fran Lewitter Nicola J. Mulder Patricia M. Palagi Maria Victoria Schneider Celia W. G. van Gelder GOBLET: The Global Organisation for Bioinformatics Learning, Education and Training. 2015 11 PLoS Comput. Biol. 4 https://doi.org/10.1371/journal.pcbi.1004143 https://www.wikidata.org/entity/Q30047203 db/journals/ploscb/ploscb11.html#AtwoodBBCGLMPSG15

Heinz Stockinger Adrian M. Altenhoff Konstantin Arnold Amos Bairoch Frederic B. Bastian Sven Bergmann Lydie Bougueleret Philipp Bucher Mauro Delorenzi Lydie Lane Philippe Le Mercier Frédérique Lisacek Olivier Michielin Patricia M. Palagi Jacques Rougemont Torsten Schwede Christian von Mering Erik van Nimwegen Daniel Walther Ioannis Xenarios Mihaela Zavolan Evgeny M. Zdobnov Vincent Zoete Ron D. Appel Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. 436-441 2014 42 Nucleic Acids Res. Webserver-Issue https://doi.org/10.1093/nar/gku380 https://www.wikidata.org/entity/Q33860694 db/journals/nar/nar42.html#StockingerAABBBBBDLMLMPRSMNWXZZZA14

Michelle D. Brazas Fran Lewitter Maria Victoria Schneider Celia W. G. van Gelder Patricia M. Palagi A Quick Guide to Genomics and Bioinformatics Training for Clinical and Public Audiences. 2014 10 PLoS Comput. Biol. 4 https://doi.org/10.1371/journal.pcbi.1003510 https://www.wikidata.org/entity/Q35145003 db/journals/ploscb/ploscb10.html#BrazasLSGP14

Anne Guérin-Dugué Carlos Avilés-Cruz Patricia Palagi Interpreting data through neural and statistical tools. 1996 ESANN https://www.esann.org/sites/default/files/proceedings/legacy/es1996-70-S.pdf conf/esann/1996 db/conf/esann/esann1996.html#Guerin-DugueAP96 Patricia M. Palagi Anne Guérin-Dugué An Architecture for Texture Segmentation: from Energy Features to Region Detection. 956-962 1995 conf/iwann/1995 IWANN db/conf/iwann/iwann1995.html#PalagiG95 https://doi.org/10.1007/3-540-59497-3_273

Anne Guérin-Dugué Patricia M. Palagi Texture segmentation using pyramidal Gabor functions and self-organising feature maps. 25-29 1994 1 Neural Process. Lett. 1 https://doi.org/10.1007/BF02312398 db/journals/npl/npl1.html#Guerin-DugueP94

William Beaudot Patricia Palagi Jeanny Hérault Realistic Simulation Tool for Early Visual Processing Including Space, Time and Colour Data. 370-375 1993 conf/iwann/1993 IWANN db/conf/iwann/iwann1993.html#BeaudotPH93 https://doi.org/10.1007/3-540-56798-4_175 Eva Alloza Adrian M. Altenhoff Valentin Amrhein Victoria Dominguez Del Angel Ron D. Appel Ricardo Arcila Konstantin Arnold Terri K. AttwoodTeresa K. Attwood Carlos Avilés-Cruz Amos Bairoch Balint Laszlo Balint Frederic B. Bastian Bérénice Batut Niall Beard William Beaudot Louisa J. Bellis Sven Bergmann Erik Bongcam-Rudloff Alexander Botzki Lydie Bougueleret Michelle D. Brazas Philipp Bucher Aidan Budd Melissa L. Burke Alexia Cardona Denise Carvalho-Silva Leyla Jael CastroLeyla J. García Martin Cook Manuel Corpas Michael Dayan Mauro Delorenzi Jure Dimec Alexandros C. Dimopoulos Michel Dumontier Christine Durinx Pedro L. Fernandes Eva Furrer Bruno A. Gaëta Pascale Gaudet Prakash Singh Gaur Celia W. G. van Gelder Vivienne Baillie Gerritsen Carole A. Goble Anne Guérin-Dugué Kim T. Gurwitz John M. Hancock Leonhard Held Lars G. Hemkens Jeanny Hérault Carlos Horro Perrine Janiaud Rafael C. Jiménez Pascal Kahlem Eija Korpelainen Roland Krause Mateusz Kuzak Lydie Lane Lee D. Larcombe Brane Leskosek Fran Lewitter Philip Lijnzaad Jessica M. Lindvall Frédérique Lisacek Daniel MacLean Diana Marek Scott Markel Paula Andrea Martínez Annette McGrath Peter McQuilton Philippe Le Mercier Christian von Mering Olivier Michielin Sarah L. Morgan Nicola J. Mulder Tuur Muyldermans Aleksandra Nenadic Erik van Nimwegen Ståle Nygård B. F. Francis Ouellette Radoslaw Panczak Aleksandra Pawlik Loredana Le Pera Hedi Peterson Fotis E. Psomopoulos Meike Ramon Päivi Rauste Nicolas Rothen Kristian Rother Jacques Rougemont Gabriella Rustici Susanna-Assunta Sansone Maria Victoria Schneider Simon Schwab Russell Schwartz Torsten Schwede Stephen Senn Vojtech Spiwok Heinz Stockinger Jan Taylor Rochelle E. Tractenberg Allegra Via Marko Vidak Daniel Walther Mick Watson Daniel Wibberg Ioannis Xenarios Mihaela Zavolan Evgeny M. Zdobnov Vincent Zoete