CoolBox
  • Installation & Usage
  • Quickstart (API)
  • Quickstart (CLI)
  • CoolBox Gallery
    • Colormaps of Hi-C contact map
    • Resolution, Balance and Normalize
    • Smoothing matrix with gaussian filter
    • Hi-C features like Virtual4C, DiScore, InsuScore
    • TADs
    • Peak Coverage
    • Hi-C Diff
    • Differential Chromatin Interaction
    • JointView
    • Hist track styles
    • BigWig Coverage
    • Arcs style
    • Color
    • Arcs coverage
    • SNP Manhattan plot
    • Ideogram
    • DNA features
    • Decay curve
  • Customizing CoolBox
  • API Reference
CoolBox
  • CoolBox Gallery
  • View page source

CoolBox Gallery

Hi-C

Image
Colormaps of Hi-C contact map
Image
Resolution, Balance and Normalize
Image
Smoothing matrix with gaussian filter
Image
Hi-C features like Virtual4C, DiScore, InsuScore
Image
TADs
Image
Peak Coverage
Image
Hi-C Diff
Image
Differential Chromatin Interaction
Image
JointView

Others

Image
Hist track styles
Image
BigWig Coverage
Image
Arcs style
Image
Arcs coverage
Image
SNP Manhattan plot
Image
Ideogram
Image
DNA features

Auxiliary functions

Image
Decay curve
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